PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_66681g0010
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family bHLH
Protein Properties Length: 553aa    MW: 61665.4 Da    PI: 4.7587
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_66681g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.84.5e-09383425754
                    HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
            HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     +ErrRR+r+N+++  Lr+++P+      +K++  +iL  ++e+ k+L
  MA_66681g0010 383 LAERRRRKRLNERLCMLRSVVPTI-----TKMDRTSILSDTIEHTKQL 425
                    58*********************7.....6**************9987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.062376425IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.49E-14379446IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003535.4E-10382431IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.107.7E-13383437IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000108.6E-7383425IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 553 aa     Download sequence    Send to blast
MDTSIYDQIF MSRTMAECTW GNSNYGHFDI SEYRVLEEGN GLLALMDSNF LAANSVLNVT  60
EATRSPNTEL VRSQYGNDIF GGCTHNLSDQ AYSCAWNAAY PRDLDENSFR FGHYTSSKCF  120
QTLNWEDRGD GSLGYGAEFQ QNTFGGATAF NSENSNDLNK VQPVDQGNNI CEILREQASQ  180
NELGFICSNV NDIRHVGSDS SKFSVGYFHE NSMKSTIGQP YNGISFNQYD EMEMNGVLLG  240
YNTESAISTL LNEDKTSIEP LEFDGTKGIV TVSVSELDGF DDKTPLSTSY ETEIYSDQQS  300
PQTVGLPLKV SENRVPINTA ASQLVKSDWN REENGGRMDE LFVMNDANGT KVTYTTGEGE  360
SSNAKVVRGG VSKSKGHPAK NLLAERRRRK RLNERLCMLR SVVPTITKMD RTSILSDTIE  420
HTKQLLQQIQ FLHGELQPQA NWPEHLRAYE GYFRSAGMDC DQKFADKHIS KFEVKRTGTR  480
DLNIHMTCQT NPSILLSTIS TLESFGLDIQ QAIISCFSDF GVQAHCSEID KAKSNIRPED  540
IKLALLQTAG YLG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1384391ERRRRKRL
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP5571678
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65640.11e-25beta HLH protein 93